MacKenzie TMG, Cisneros R, Maynard RD, and Snyder MP: Reverse-ChIP techniques for identifying locus-specific proteomes: a key tool in unlocking the cancer regulome. Cells (2023) 12, 1860. Cells
Tyumentseva M, Tyumentsev A, and Akimkin V: CRISPR/Cas9 landscape: current state and future perspectives. Int. J. Mol. Sci. (2023) 24, 16077. Int. J. Mol. Sci.
2021
Fujita H, Fujita T, and Fujii H: Locus-specific genomic DNA purification using the CRISPR system: methods and applications. CRISPR J. (2021) 4 (2), 290-300. CRISPR J.
2019
Fujita T, and Fujii H: Purification of specific DNA species using the CRISPR system. Biology Methods and Protocols (BIOMAP) (2019) 4 (1), bpz008. BIOMAP
2018
Maass PG, Barutcu AR, Rinn JL: Interchromosomal interactions: A genomic love story of kissing chromosomes. J. Cell Biol. (2018) 218, 27-38. J. Cell Biol.
Xu X, Qi LS: A CRISPR-dCas Toolbox for Genetic Engineering and Synthetic Biology. J. Mol. Biol. (2018) 431, 34-47. J. Mol. Biol.
2017
Fujita T, Fujii H: in vitro engineered DNA-binding molecule-mediated chromatin immunoprecipitation (in vitro enChIP) using CRISPR ribonucleoproteins in combination with next-generation sequencing (in vitro enChIP-Seq) for the identification of chromosomal interactions. Bio-protocol (2017) 7 (22), doi: 10.21769/BioProtoc.2612. Bio Protoc.
2016
Fujita T, Fujii H: Isolation of specific genomic regions and identification of associated molecules by enChIP. JoVE (2016) issue 107, doi: 10.3791/53478. JoVE
Fujita T, and Fujii H: Biochemical analysis of genome functions using locus-specific chromatin immunoprecipitation technologies. Gene Regul. Syst. Bio. (2016) Suppl. 1, 1-9. Gene Regul. Syst. Bio.
2015
Fujita T, Fujii H: Applications of engineered DNA-binding molecules such as TAL proteins and the CRISPR/Cas system in biology research. Int. J. Mol. Sci. (2015) 16, 23143-23164. Int. J. Mol. Sci.
Fujii H, Fujita T: Isolation of specific genomic regions and identification of their associated molecules by engineered DNA-Binding molecule-mediated chromatin immunoprecipitation (enChIP) using the CRISPR system and TAL proteins. Int. J. Mol. Sci. (2015) 16, 21802-21812. Int. J. Mol. Sci.
2014
Fujita T, Fujii H: Identification of proteins interacting with genomic regions of interest in vivo using engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP). Bio-protocol (2014) 4 (10), doi: 10.21769/BioProtoc.1124. Bio Protoc.
Harrison MM, Jenkins BV, O'Connor-Giles KM, Wildonger J.: A CRISPR view of development. Genes Dev. (2014) 28(17):1859-72. Genes Dev.
Fujita T, Fujii H: New directions for epigenetics: application of engineered DNA-binding molecules to locus-specific epigenetic research. Handbook of Epigenetics, Third Edition, Academic Press (Elsevier), Editor: Trygve O. Tollefsbol, (2022) 843-868. Handbook of Epigenetics, Third Edition
2017
Fujita T, Fujii H: New directions for epigenetics: application of engineered DNA-binding molecules to locus-specific epigenetic research. Handbook of Epigenetics, Second Edition, Academic Press (Elsevier), Editor: Trygve O. Tollefsbol, (2017) 635-652. Handbook of Epigenetics, Second Edition
2015
Fujita T, Fujii H: Isolation of specific genomic regions and identification of associated molecules by engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP) using CRISPR. Methods Mol. Biol. (2015) 1288:43-52. doi: 10.1007/978-1-4939-2474-5_4. PubMed
